MASTER ALUMNI |
NAME |
THESIS TITLE |
ADVISOR |
YEAR |
Habibe Cansu DEMİREL |
Modeling the tumor-specific network rewiring by integrating alternative splicing events with structural interactome |
Assoc. Prof. Dr. Nurcan TUNÇBAĞ |
2019 |
Meriç KINALI |
Leveraging the human kinome for anticancer agent cytotoxicity potency prediction |
Prof. Dr. Rengül ÇETİN ATALAY |
2019 |
Cansu DİNÇER |
3D spatial organization and network-guided comparison of mutation profiles in glioblastoma |
Assoc. Prof. Dr. Nurcan TUNÇBAĞ |
2019 |
Elif BOZLAK |
de novo SNP calling and demographic inference using trio genome data |
Asst. Prof. Dr. Aybar Can ACAR |
2019 |
Evrim FER |
Testing natural selection on polygenic trait-associated alleles in Anatolia using neolithic and present-day human genomes |
Assoc. Prof. Dr. Mehmet SOMEL |
2019 |
Gökçe SENGER |
Integrative network modeling of the dasatinib treatment in glioblastoma stem cells |
Assoc. Prof. Dr. Nurcan TUNÇBAĞ |
2019 |
Alperen TACİROĞLU |
ODYSSEY: a tool for microRNA-mRNA expression and interaction visualization |
Asst. Prof. Dr. Aybar Can ACAR |
2018 |
Tuğba KAYA |
Structural mapping and network analysis of patient-specific mutations in glioblastoma |
Assoc. Prof. Dr. Nurcan TUNÇBAĞ |
2018 |
Sultan Nilay CAN |
Mapping and analysis of human disease network map (diseasome) on mouse genotype & phenotype network |
Prof. Dr. Rengül ÇETİN ATALAY |
2017 |
Semih ALPSOY |
Drug selection for malignant melanoma using biomarkers generated by weighted gene co-expression network analysis (WGCNA) |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2017 |
Güngör BUDAK |
Reconstruction of the temporal signaling network in salmonella infected human cells |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2016 |
Mona SHOJAEI |
Identification of gene mutations involved in drug resistance in liver cancer using RNA-seq data analysis |
Prof. Dr. Rengül ÇETİN ATALAY |
2016 |
Atefeh LAFZI |
Investigating the role of RNA-binding proteins (RBPs) in explaining differential gene expression in cancer |
Assoc. Prof. Dr. Yeşim AYDIN SON
|
2016 |
Gökhan ERSOY |
A multi-layered graphical model of the relation among SNPs, genes, and pathways based on subgraph search |
Assoc. Prof. Dr. Yeşim AYDIN SON
|
2015 |
Bilge SÜRÜN |
Analysis of motifs in microRNA-transcription factor gene regulatory networks |
Asst. Prof. Dr. Aybar Can ACAR |
2014 |
Burcu YALDIZ |
Investigation of structural properties of methylated human promoter regions in terms of DNA helical rise |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2014 |
Kübra NARCI |
Design of a sequence-based miRNA clustering method; analysis of fungal milRNAs and host organism target genes |
Prof. Dr. Mahinur S. AKKAYA |
2014 |
Simge Gökçe ÖRSÇELİK |
Prediction of insulin resistance by statistical tool MARS |
Prof. Dr. Gerhard-Wilhelm WEBER |
2014 |
Ceyhun GEDİKOĞLU |
Integration of METU-SNP databases via RDF For Pi-SNP web service |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2014 |
Gökçe OĞUZ |
Cytokine polymorphism catalog (CytoCAT) for the analysis of phenotype associations |
Asst. Prof. Dr. Aybar Can ACAR |
2014 |
Onur BALOĞLU |
Analysis of 3'UTR shortening events in breast cancer |
Prof. Dr. Tolga CAN |
2013 |
Hüseyin Alper DÖM |
Investigation of schizophrenia-related genes and pathways through genome-wide association studies |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2013 |
Erhan AKDEMİR |
A framework for gene co-expression network analysis of lung cancer |
Prof. Dr. Tolga CAN |
2013 |
Sevgin DEMİRCİ |
mtDNA based genetic diversity of native sheep breeds and Anatolian mouflon in Turkey
|
Prof. Dr. İnci TOGAN |
2012 |
Sinan Uğur UMU |
Mining fungal effector candidates in biotrophic plant pathogens: rusts and mildews |
Prof. Dr. Mahinur S. AKKAYA |
2012 |
Burak DEMİRAY |
Investigation of human promoter CpG content and methylation profiles at different conservation levels |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2012 |
Eyüp Serdar AYAZ |
Reconstructing signaling pathways from RNAi data using genetic algorithms |
Prof. Dr. Tolga CAN |
2011 |
Onat KADIOĞLU |
Determination of performance parameters for AHP based single nucleotide polymorphism (SNP) prioritization approach on Alzheimer’s disease data |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2011 |
Hande ACAR |
Bioinformatic analyses in microsatellite-based genetic diversity of Turkish sheep breeds |
Prof. Dr. İnci TOGAN |
2010 |